Table 3

Rainbow trout BAC end sequences BlastN statistics

Medaka

Stickleback

Zebrafish


Total BES with hits

15,896

17,499

14,716

BES with unique hitsa

15,379

15,612

13,868

BACs

BAC with one end

14,206

15,467

13,304

Paired BAC-ends

845

1,016

706

Paired BAC-ends with unique hits

792

812

632

Unique hits paired BAC-ends matched on the same chromosome

418

566

360

Also identified by BlastX

85

105

105

Microsynteny identified

307

421

176


a The bioinformatic filtering criteria used for identifying 'unique' hits are described in the methods section.

Genet et al. BMC Genomics 2011 12:314   doi:10.1186/1471-2164-12-314

Open Data