Additional file 6.
List of the EST-linked SNP and descriptive statistics. List of SNP markers in the set of 147 SNP targeted for genotyping with the Sequenom MassARRAY platform. The protein changes both at the synonymous (S) and the non-synonymous (NS) sites, the codon position of the point mutation, the genotyping success rate, and the minor allele frequency are shown. The characteristics of the contigs from where the SNPs were developed are also shown, in terms of length, polymorphism, and number of sequences in the contig. Nr: SNPs that did not fit in any assay design.
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Orsini et al. BMC Genomics 2011 12:309 doi:10.1186/1471-2164-12-309