Table 3

The 1,855 SSR motifs identified in 1,777 sequences

Motif

Counts

%

Average motif length

Number of repeats


3

4

5

6

7

8

9

10

> 10


Mononucleotide

160

8.6

17.73

-

-

-

-

-

-

-

-

160

Dinucleotide

345

18.6

19.46

-

-

-

-

-

107

67

47

124

Trinucleotide

641

34.6

19.11

-

-

250

177

109

51

18

16

20

Tetranucleotide

216

11.6

18.44

-

125

52

21

14

2

1

-

1

Pentanucleotide

308

16.6

17.4

211

75

15

5

2

-

-

-

-

Hexanucleotide

185

10.0

23.06

85

57

29

11

2

1

-

-

-


Barchi et al. BMC Genomics 2011 12:304   doi:10.1186/1471-2164-12-304

Open Data