Locus pairs containing a breakpoint pair have more reads than expected. Histogram of values obtained by sampling 500 times the pairwise read count data, using pairs without breakpoints but at the same distance (left), same distance and same DNaseI sensitivity (middle), same distance and same gene density (right) as those in the breakpoint sets. The red vertical bar show the value for the actual breakpoint set.
Véron et al. BMC Genomics 2011 12:303 doi:10.1186/1471-2164-12-303