Table 5

Winter Norstar genes that exhibit 25-fold or more change in expression during cold-treatment and show significant interaction between genotype and duration of cold treatment.

Probeset ID

Description

No

Ma

wMa

sNo


Ta.1165.1.A1_at

cold-responsive protein COR14a

177

203

231

189

Ta.245.1.S1_at

cold-responsive protein COR14b

173

61

67

129

Ta.28613.1.S1_at

cold acclimation protein WCOR726

124

5

7

61

Ta.1138.1.S1_at

cold-responsive LEA/RAB-related COR protein

117

31

53

47

Ta.30607.1.A1_at

MADS-box protein Ta.VRN-A1

98

2

117

3

TaAffx.17284.1.A1_at

Cold acclimation protein WCOR518

93

10

34

66

TaAffx.124475.1.A1_at

low-temperature responsive gene BLT14.2

89

3

7

17

Ta.13784.1.S1_at

low-temperature responsive gene BLT14.1

89

24

42

71

Ta.23327.1.S1_at

Unknown

61

5

10

30

Ta.13255.1.S1_at

Dehydrin

50

3

6

8

Ta.142.1.S1_at

MADS-box protein TaVRT-1

49

59

83

90

Ta.20519.1.S1_at

Extensin-like

48

2

2

17

TaAffx.43393.1.S1_at

Rubisco LSU

46

72

110

48

Ta.29534.1.S1_at

senescence-specific cysteine protease SAG12

45

232

238

197

Ta.7388.2.S1_a_at

Jacalin-like lectin domain containing protein

44

6

57

5

Ta.13239.1.S1_at

glycine-rich cell wall protein homolog

41

28

29

28

Ta.19303.1.S1_at

Unknown

40

11

11

38

Ta.30798.3.S1_at

gamma-VPE

36

21

25

25

Ta.613.1.S1_at

LEA76 homologue type2

32

15

18

22

TaAffx.34169.1.S1_at

LEA29 D-29 protein

32

11

22

11

Ta.865.2.A1_at

arginine/serine-rich protein, putative

32

19

24

25

Ta.9000.1.S1_at

beta-fructosidase

29

38

36

29

Ta.27389.1.S1_at

Gamma-1-purothionin

28

19

40

35

Ta.28533.1.S1_at

Photosystem II 10 kDa polypeptide, chloroplast

27

4

4

6

Ta.18720.1.S1_a_at

Gamma-thionin

26

42

88

65

Ta.30509.1.A1_at

Protamine

26

2

5

9

Ta.9696.1.S1_at

Flowering promoting factor-like 1

25

3

8

3


Fold-change in expression was based on the difference between the maximum and minimum levels of gene expression from 0 to 70 days of cold treatment.

Laudencia-Chingcuanco et al. BMC Genomics 2011 12:299   doi:10.1186/1471-2164-12-299

Open Data