Open Access Research article

Novel transposable elements from Anopheles gambiae

Rita D Fernández-Medina1*, Cláudio J Struchiner12 and José MC Ribeiro3

Author Affiliations

1 Fundação Oswaldo Cruz, Escola Nacional de Saúde Pública Sergio Arouca, Av. Brasil, 4365. 21040 360. Rio de Janeiro, Brazil

2 Instituto de Medicina Social, Universidade do Estado de Rio de Janeiro, Rio de Janeiro, Brazil

3 Section of Vector Biology, Laboratory of Malaria and Vector Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Rockville, MD 20852, USA

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BMC Genomics 2011, 12:260  doi:10.1186/1471-2164-12-260

Published: 23 May 2011

Additional files

Additional file 1:

AnoTExcel database in standalone format. It includes the links that need to be extracted to the user's computer http://exon.niaid.nih.gov/transcriptome/TE/A_gambiae/AnoTExcel-SA.zip webcite.

Format: DOC Size: 24KB Download file

This file can be viewed with: Microsoft Word Viewer

Open Data

Additional file 2:

Web-based links of AnoTExcel. http://exon.niaid.nih.gov/transcriptome/TE/A_gambiae/AnoTExcel-WEB.zip webcite.

Format: DOC Size: 24KB Download file

This file can be viewed with: Microsoft Word Viewer

Open Data

Additional file 3:

Full-length LTR elements described in AnoTExcel. Main structural and evolutionary characteristics of the Full-length LTR elements present in AnoTExcel.

Format: XLS Size: 26KB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional file 4:

Nucleotide distances (p-distances) among Copia elements from Anopheles gambiae. Matrix with the p-distances among all the Copia elements previously described in Repbase (Copia1-5 + Mtanga) plus the Novel Copia elements described here (clu134 and 149 from AnoTExcel).

Format: XLS Size: 19KB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional file 5:

Novel LTR elements described in AnoTExcel. Main structural and evolutionary characteristics of four novel LTR elements in AnoTExcel.

Format: XLS Size: 21KB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional file 6:

Full-length NLTR elements described in AnoTExcel. Main structural and evolutionary characteristics of NLTR elements in AnoTExcel.

Format: XLS Size: 28KB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional file 7:

Full-length Class II elements described in AnoTExcel. Main structural and evolutionary characteristics of the Full-length Class II elements in AnoTExcel.

Format: XLS Size: 19KB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional file 8:

MITE-like Novel elements related to unknown TEs described in AnoTExcel. Main structural and evolutionary characteristics of MITE-like elements described in AnoTExcel.

Format: XLS Size: 25KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data