Additional file 3.
The majority of genes exhibiting robust Hdac1-dependent gene expression are involved in CNS development. List of 84 probes that are consistently differentially expressed >2-fold in Hdac1ATG1 and Standard Control morphants at each of the three distinct time points, including their associated Unigene identifier and gene name. Fold-changes are listed for all three morphant time points and the hdac1 mutant fold change at 27 hpf is also indicated. Orange signifies probes corresponding to transcripts that are specifically expressed in the CNS or have a CNS-oriented function. Red labels indicate probes corresponding to transcripts that did not exhibit statistically significant differential expression greater than 1.2-fold in hdac1 mutant and wild-type sibling embryos, and are therefore likely to represent gene expression changes resulting from off-target effects of the Hdac1ATG1 morpholino.
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Harrison et al. BMC Genomics 2011 12:24 doi:10.1186/1471-2164-12-24