Table 1

Genome features

Property

W22703 pYV-

Y. enterocolitica 8081 [18]


Size [bp]

<4,754,619

4,615,899

G + C content [%]

46.9

47.3

Number of contigs >1000 bp

305

2 (linear chromosome, plasmid pYV)

Number of CDs

>4,003

4,037

Coding density [%]

84.4

83.8

Average gene size

unknown

968

rRNA operons

unknown

7

tRNAs

≥ 68

81

Common IS elements (numbers)

IS911A, ISRM3, IS1328 (3), IS1329, IS1400, IS1666, IS1667 (4), IS1668, IS1669

IS elements not shared

IS2A/D/F/H/I/K; iso-IS1N; IS1328; IS911B

IS3, IS4, IS1111, IS1222, IS1330, IS1541, IS1660 (6), IS1664, IS1665 (6), IS1669 (4), IS1664 (2), IS1222, IS3, IS Sod4

Prophage regions

2

4

Sequence coverage

16-fold

9-fold


Fuchs et al. BMC Genomics 2011 12:168   doi:10.1186/1471-2164-12-168

Open Data