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Open Access Research article

Stochastic variation of transcript abundance in C57BL/6J mice

Peter T Vedell, Karen L Svenson and Gary A Churchill*

Author Affiliations

The Jackson Laboratory, 600 Main Street, Bar Harbor, Maine 04609, USA

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BMC Genomics 2011, 12:167  doi:10.1186/1471-2164-12-167

Published: 30 March 2011

Additional files

Additional file 1:

Supplemental Figure S1. P-value histograms for between-mouse significance tests.

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Additional file 2:

Supplemental Figure Captions. Captions for supplemental figures.

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Additional file 3:

Supplemental Table S1. Enrichments scores of the gene coexpression modules.

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Additional file 4:

Supplemental Figure S2. Graphical model showing relationships between modules.

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Additional file 5:

Supplemental Table S2. Pairwise Pearson correlations for module eigengenes.

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Additional file 6:

Supplemental Figure S3. Cross-platform comparison of liver eigengene profiles.

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Additional file 7:

Supplemental Figure S4. Transcript abundance profiles for fatty acid metabolism genes in the liver.

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Additional file 8:

Supplemental Figure S5. Transcript abundance profiles for circadian rhythm genes.

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Additional file 9:

Supplemental Figure S6. Transcript abundance profiles for growth-hormone regulated genes in kidney and liver.

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Additional file 10:

Supplemental Table S3. Within-mouse correlation statistics for selected genes in adipose.

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Additional file 11:

Supplemental Figure S7. Transcript abundance profiles for variable genes reported in adipose tissue.

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Additional file 12:

Supplemental Figure S8. Transcript abundance profiles for variable brown fat signature genes in white fat tissue.

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Additional file 13:

Supplemental Figure S9. Transcript abundance profiles showing region-specific variation of gene expression in heart.

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Additional file 14:

Supplemental Figure S10. Transcript abundance profiles for androgen-regulated variable genes in the kidney.

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Additional file 15:

Supplemental Table S4. Transcript abundance variation statistics for Pritchard et al (2001) dataset.

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Additional file 16:

Supplemental Figure S11. Transcript abundance profile for Cfd gene in kidney.

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