Split-window view of multiple regions for comparative analysis. Rice-Map supports split-window view of multiple regions to facilitate comparative analysis among different genomic regions. User can select an interesting chromosome region with the "magic wand" tool and view the region in a new sub-window. For example, user can view the OsSPL14 gene (LOC_Os08g39890.1) in japonica and find its best gene hit in indica (BGIOSIBCE028446.1) by the hint of "Best Indica Hit" track. Then user can view these two genes simultaneously in different windows and arrange them freely. The region can also be displayed in basepair view in another sub-window to present the detailed nucleotide information beneath the graphic annotation.
Wang et al. BMC Genomics 2011 12:165 doi:10.1186/1471-2164-12-165