Table 1

Size variation of the orthologous Orp regions of Oryza investigated

Genome

Genome

Size of BAC or contig

Size of corresponding region in

Size variation relative to O. sativa (kb)



Speciesa

designation

sizeb (Mb)

BAC or contig

(kb)c

O. sativa (kb)d

Contraction

Expansion


O. nivara

AA

448

OR_BBa0014L06

214

202

12

O. glaberrima

AA

354

OG_BBa0075G14/OG_BBa0001L21

190

309

119

O. punctata

BB

423

OP__Ba0008J05

192

339

147

O. australiensis

EE

960

OA_Aba0108F22

190

401

212

O. brachyantha

FF

338

OB__Ba0050L03

150

342

192

Sorghum

HH

735

SB18C08

138e

313e

175


aOryza species refers to Wing et al., 2005 and sorghum refers to Ma et al., 2005

bRefers to Bennett and Leitch, 2003

cEstimated by gel electrophoreses of restriction enzyme-digested fragments or sequencing

dO. sativa subspecies, japonica (c.v., Nipponbare)

eThe corresponding region comparable

Tian et al. BMC Genomics 2011 12:142   doi:10.1186/1471-2164-12-142

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