Additional file 5.

Neighbor-Joining "Phylogeny" of the AA-genome varieties constructed using MEGA4 based on the presence/absence of a set of LTR-retrotransposons in individual varieties as illustrated in Figure 5. Varieties are numbered according to their orders shown in Figure 5 and Additional file 2.

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Tian et al. BMC Genomics 2011 12:142   doi:10.1186/1471-2164-12-142