Additional file 3.

PCR verification of a segmental inversion present in O. glaberrima, but absent in O. sativa and O. nivara varieties. (A) Schematic primer design for amplification of inversion boundaries. (B) PCR products of primer pairs F1/R1 (panel b) and F2/R2 (panel c), and Waxy genes (panel a, control). Primers are shown in Additional file 4. Varieties are numbered according to their orders in Additional file 2.

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Tian et al. BMC Genomics 2011 12:142   doi:10.1186/1471-2164-12-142