Additional file 1.

Sequence annotation of different BACs in this study. * 1605848 to 2060871 region of O. sativa subspecies japonica (c.v., Nipponbare) gemone sequece (Pseudomolecule 4.0). ** Intact-tsd, intact element flanked by target site duplication; solo-tsd; solo LTR flanked by target site duplication; intact-notsd, intact element without target site duplication; solo-notsd; solo LTR without target site duplication; &, internal sequence of LTR-retrotransposon; s, truncated fragment.

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Tian et al. BMC Genomics 2011 12:142   doi:10.1186/1471-2164-12-142