Table 2

Statistics of 3D-interologs database on 19 species commonly used in research projects

Species

3D-domain interologs

IntAct


Mus musculus

8,876

2,634

Homo sapiens

8,639

18,716

Danio rerio

4,564

0

Xenopus laevis

4,057

58

Rattus norvegicus

3,685

958

Bos taurus

3,549

174

Drosophila melanogaster

2,644

25,036

Arabidopsis thaliana

2,418

2,111

Caenorhabditis elegans

1,433

4,684

Saccharomyces cerevisiae

443

36,821

Escherichia coli

426

14,007

Schizosaccharomyces pombe

371

341

Dictyostelium discoideum

284

84

Zea mays

219

0

Oryza sativa

193

69

Takifugu rubripes

191

0

Chlamydomonas reinhardtii

122

14

Plasmodium falciparum

68

2,707

Pneumocystis carinii

23

0

other species

131,089

2,272


Total

173,294

110,686


Lo et al. BMC Genomics 2010 11(Suppl 3):S7   doi:10.1186/1471-2164-11-S3-S7

Open Data