Table 4

Activation state change examples

equal, non-zero activation state changes - vxy incremented


wt

G1(-/-)

G2(-/-)

G3(-/-)

G4(-/-)

G5(-/-)

G6(-/-)

G7(-/-)

G8(-/-)


G1

0

0

0

0

0

0

0

G2

1

1

0

1

1

1

1

1

1

G3

0

0

1

0

0

0

0

0

0

G4

1

0

1

0

0

1

1

1

1

G5

1

1

1

1

1

0

1

1

1

G6

0

0

0

0

0

0

0


equal magnitude, opposing-signed activation state changes - vxy decremented


wt

G1(-/-)

G2(-/-)

G3(-/-)

G4(-/-)

G5(-/-)

G6(-/-)

G7(-/-)

G8(-/-)


G1

0

0

0

0

0

0

0

G2

1

1

1

1

1

1

1

G3

0

0

1

0

0

0

0

0

0

G4

1

0

1

0

0

1

1

1

1

G5

1

1

1

1

1

0

1

1

1

G6

0

0

1

0

0

0

0

0

0


activation state changes equal to zero - qxy incremented


wt

G1(-/-)

G2(-/-)

G3(-/-)

G4(-/-)

G5(-/-)

G6(-/-)

G7(-/-)

G8(-/-)


G1

0

0

1

0

0

0

0

0

0

G2

1

1

0

1

1

1

1

1

1

G3

0

0

1

0

0

0

0

G4

1

0

1

0

0

1

1

G5

1

1

1

1

1

0

1

1

1

G6

0

0

1

0

0

0

0

0

0


Activation State Change Examples - genes are divided by row, samples are divided by column

Oviatt et al. BMC Genomics 2010 11(Suppl 2):S6   doi:10.1186/1471-2164-11-S2-S6

Open Data