Table 2

Individual genes selected among the TNFAIP1/POLDIP2 SFGM and 6 "neighbouring" genes which proved to be survival significant in at least one cohort (P value ≤ 0.05).

Affymetrix U133 (A&B)

probeset

Gene Symbol

Uppsala cohort(individual)

Stockholm P value (individual)


Wald statistic

P value

FDR corrected

P value = 4.2E-03

Wald statistic

P value

FDR corrected

P value = 5.1E-03


B.222425_s_at

POLDIP2

1.5E-05

Significant

2.4E-02

Not significant

A.210312_s_at

IFT20

4.1E-04

Significant

2.4E-02

Not significant

A.212282_at

TMEM97

1.1E-03

Significant

3.0E-03

Significant

B.225375_at

TMEM199

2.2E-02

Not significant

7.2E-04

Significant


The Uppsala cohort P value correction = 4.2E - 03; the Stockholm cohort P value correction = 5.1E - 03.

Grinchuk et al. BMC Genomics 2010 11(Suppl 1):S9   doi:10.1186/1471-2164-11-S1-S9

Open Data