Table 1

Database sources and statistics of Functional labels (FLs), proteins, and fractions of poly- and monoform TUs in different species.

Organism

Database

# FLs

#Proteins

Poly/MonoTUs (%)


ARATH

TAIR/RIKEN

2463

27247

6/8920 (0.07)

CAEEL

WormBase

1150

7854

65/4200 (1.55)

DROME

FlyBase

2335

11129

141/7185 (1.96)

CIOIN

Ensembl

2934

12417

505/8567 (5.89)

FUGRU

Ensembl

3306

24245

843/10760 (7.83)

MOUSE

RIKEN/FANTOM

5172

52957

2353/18574 (12.67)

HUMAN

RIKEN/FANTOM

5183

49829

2315/15944 (14.52)


Kanapin et al. BMC Genomics 2010 11(Suppl 1):S4   doi:10.1186/1471-2164-11-S1-S4

Open Data