Table 4

Variable virulence associated genes other than those found in the prfA cluster and their distribution in the genomesa

Gene designation

EGD-e homologue

Lmb EGD-e

Lmb F2365

Lmb CLIP 80459

Lmb lineage IIIA

Lmb lineage IIIC

Lib hly+

Livb

Lsb hly+

Lsb hly-

Lmab hly-

Lib hly-1

Lib hly-2

Lwb hly-


lmo0206

lmo0206

+

+

+

+

+

+

-

-

-

-

-

-

-

lmo0257

lmo0257

+

+

+

+

+

+

+

+

+

+

-

-

+

inlH/inlC2

lmo0263

+

+

+

-

+

-

-

-

-

-

-

-

-

vip

lmo0320

+

+

+

-

-

-

-

-

-

-

-

-

-

inlAa

lmo0433

+

+

+

+

+

+

+

-

-

-

-

-

-

inlBa

lmo0434

+

+

+

+

+

-

+

-

-

-

-

-

-

uhpT

lmo0838

+

+

+

+

+

+

+

+

+

-

-

-

-

lmo0915

lmo0915

+

+

+

+

+

+

+

-

+

+

+

+

+

aut

lmo1076

+

+

+

+

-

+

+

+

+

+

+

+

+

lmo1081

lmo1081

+

-

-

-

-

-

-

+

-

-

-

-

-

lmo1082

lmo1082

+

-

-

-

-

-

-

+

-

-

-

-

-

lmo1099

lmo1099

+

-

-

-

-

-

-

-

-

-

-

-

-

lmo1102

lmo1102

+

-

-

-

-

-

-

-

-

-

-

-

-

lmo1290

lmo1290

+

+

+

+

+

-

+

-

+

+

-

-

-

inlCa

lmo1786

+

+

+

-

+

-

+

-

-

-

-

-

-

lmo2026

lmo2026

+

-

-

-

-

-

-

-

-

-

-

-

-

bsh

lmo2067

+

+

+

+

+

-

-

-

-

-

-

-

-

lmo2157

lmo2157

+

+

+

-

-

-

+

-

-

+

-

-

-

lmo2439

lmo2439

+

+

+

+

+

+

+

+

-

+

+

+

+

ami

lmo2558

+

+

+

+

+

-

-

+

+

+

+

+

+

lmo2713

lmo2713

+

+

+

+

+

+

-

+

+

+

+

+

+

inlJ

lmo2821

+

+

+

-

+

-

-

-

-

-

-

-

-


a The genes listed here are based on 78 putative virulence associated genes reported by Camejo et al. [45]. Only 22 genes found to show variable presence among the 13 genomes analyzed here are shown. The absence of the prfA-cluster, inlA, inlB and inlC was additionally confirmed by PCR and in some cases sequencing (see additional file 1 for more information).

b Lm = L. monocytogenes; Li hly-1 = L. innocua CLIP 11262 (hemolysis negative); Li hly-2 = L. innocua FSL S4-378 (hemolysis negative); Li hly+ = L. innocua FSL J1-023 (hemolysis positive); Lma = L. marthii FSL S4-120; Lw = L. welshimeri SLCC5334; Liv = L. ivanovii subsp. londoniensis ATCC 49954; Ls hly+= L. seeligeri FSL N1-067 (hemolysis positive); Ls hly-= L. seeligeri FSL S4-171 (hemolysis negative).

den Bakker et al. BMC Genomics 2010 11:688   doi:10.1186/1471-2164-11-688

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