Research article
Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss
-
* Corresponding author: Henk C den Bakker hcd5@cornell.edu
- † Equal contributors
1 Department of Food Science, Cornell University, Ithaca NY, 14853, USA
2 Life Technologies Corporation, 850 Lincoln Centre Drive, Foster City, CA 94404, USA
BMC Genomics 2010, 11:688 doi:10.1186/1471-2164-11-688
Published: 2 December 2010Additional files
Additional file 1:
Primer sequences of primers used to confirm absence of specific virulence associated genes.
Format: PDF Size: 54KB Download file
This file can be viewed with: Adobe Acrobat Reader
Additional file 2:
Excel file SNP differences between L. monocytogenes F2365 and its duplicate FSL R2-574 and results of Sanger sequencing SNP confirmation.
Format: XLS Size: 19KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional file 3:
Excel file containing presence/absence data of genes in the Listeria pan-genome.
Format: XLS Size: 1.2MB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional file 4:
PDF file containing a graphic comparison of the inlAB region.
Format: PDF Size: 375KB Download file
This file can be viewed with: Adobe Acrobat Reader
Additional file 5:
PDF file containing a graphic comparison of internalin GHE region. Gray arrows indicate conserved genes adjacent to the region.
Format: PDF Size: 318KB Download file
This file can be viewed with: Adobe Acrobat Reader
Additional file 6:
PDF file containing a graphic comparison of the prfA cluster region
Format: PDF Size: 279KB Download file
This file can be viewed with: Adobe Acrobat Reader
Additional file 7:
Table in MS Excel with presence or absence of 78 virulence associated genes in the genomes of the genus Listeria.
Format: XLS Size: 43KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional file 8:
PDF-file with gene trees based on internalin genes.
Format: PDF Size: 625KB Download file
This file can be viewed with: Adobe Acrobat Reader