Correlation between H3K4me3, H3K27me3 and DNAMe modifications and gene activities. (A) Genes were ranked according to their expression levels in EP156T cells. The percentages shown along the × axis correspond to expressed genes for each kind of modification. (B) Comparison of gene activities with different epigenetic modifications in EP156T cells. Gene activities were indicated as median values of gene expression levels of each kind of genes. (C) Scatter plots between gene expression levels and epigenetic modification levels in EP156T cells. Comparison of the gene distribution (D) and the median values of gene expression (E) between genes marked by DNAMe without additional H3K4me3 and all genes marked by DNAMe in EP156T cells. (F) Scatter plots between DNAMe modification intensities and gene expression levels.
Ke et al. BMC Genomics 2010 11:669 doi:10.1186/1471-2164-11-669