Table 4

Predicted invasion and adhesion factors in NRG857c

Locus Tag

Protein

Ortholog in:

Function

Identity (%)

SPAAN Pad-Value


Invasion


NRG857_06210

putative transcriptional regulator

SMS-3-5

putative invasion gene expression up-regulator SirB

99

NA

NRG857_06250

hypothetical protein

SMS-3-5

putative invasin

93

0.44

NRG857_12485

putative intimin or invasin protein (SivH-like)

UMN026

putative intimin attaching and effacing protein or invasin protein (sivH-like)

96

NA

NRG857_13980

dinucleoside polyphosphate hydrolase

O157:H7 EDL933

putative invasion protein

100

0.12

NRG857_21885

invasion protein IbeA

SMS-3-5

invasion protein IbeA

93

0.35


Adhesion


NRG857_00700

putative fimbrial-like adhesin protein

UTI89

putative fimbrial-like adhesin protein

90

0.83

NRG857_00705

protein YadK

ED1a

protein yadK, putative fimbrial-like adhesin

95

0.79

NRG857_00710

putative fimbrial-like adhesin protein YadL

S88

putative fimbrial-like adhesin protein YadL

80

0.87

NRG857_00715

putative fimbrial-like adhesin protein YadM

ED1a

putative fimbrial-like adhesin protein YadM

100

0.86

NRG857_00730

predicted fimbrial-like protein

S88

putative fimbrial-like adhesin exported protein

95

0.87

NRG857_00985

lipoprotein involved with copper homeostasis and adhesion

UTI89

lipoprotein involved with copper homeostasis and adhesion

99

0.62

NRG857_01440

putative adhesin

S88

putative adhesin

95

0.91

NRG857_01490

putative autotransporter

S88

Putative adhesin; putative outer membrane autotransporter barrel

82

0.91

NRG857_03200

hypothetical protein

K-12 substr. W3110

predicted fimbrial-like adhesin protein

95

0.26

NRG857_04950

PgaD putative PGA biosynthesis protein

K-12 substr. MG1655

required for biofilm adhesin polysaccharide PGA synthesis

88

NA

NRG857_04960

PgaB outer membrane N-deacetylase

K-12 substr. MG1655

biofilm adhesin polysaccharide PGA export lipoprotein with a polysaccharide deacetylase activity needed for export

94

NA

NRG857_04965

outer membrane protein PgaA

K-12 substr. MG1655

biofilm adhesin polysaccharide PGA export, predicted OM protein

94

NA

NRG857_05015

DNA-binding transcriptional regulator CsgD

K-12 substr. DH10B

DNA-binding transcriptional regulator of adhesion determinants

87

0.25

NRG857_05965

hypothetical protein

536

Putative adhesin

100

0.59

NRG857_06960

putative autotransported outer membrane protein involved in cell adhesion

S88

putative autotransported outer membrane protein involved in cell adhesion

78

0.96

NRG857_07415

predicted fimbrial protein-like protein

UTI89

putative fimbrial adhesin FmlD precursor

93

0.90

NRG857_07420

predicted fimbrial protein-like protein

IAI1

putative fimbrial-like adhesin exported protein

89

0.74

NRG857_07425

fimbrial-like adhesin protein

APEC O1

fimbrial-like adhesin protein

98

0.74

NRG857_08345

Hypothetical protein

SE11

putative adhesin

98

0.66

NRG857_09925

hypothetical protein

SE11

putative adhesin

95

NA

NRG857_10700

putative exported fimbrial-like adhesin protein

UTI89

putative Yeh fimbiral adhesin YehA precursor

91

0.81

NRG857_10715

putative fimbrial-like adhesin protein

ED1a

putative fimbrial-like adhesin protein

89

0.82

NRG857_10720

hypothetical protein

APEC O1

putative fimbrial-like adhesin protein

100

0.33

NRG857_11325

adhesin

O157:H7 str. EC4115

putative outer membrane autotransporter adhesin

78

0.95

NRG857_11815

putative exported fimbrial-like adhesin protein

S88

putative exported fimbrial-like adhesin protein

92

0.76

NRG857_11820

fimbrial-like protein YfcQ precursor

S88

putative fimbrial-like adhesin exported protein

99

0.83

NRG857_11825

hypothetical protein

S88

putative fimbrial-like adhesin exported protein

96

0.57

NRG857_11840

putative fimbrial-like adhesin protein

S88

fimbrial-like adhesin protein

76

0.78

NRG857_15155

putative fimbrial protein

S88

putative fimbrial-like adhesin protein

100

0.75

NRG857_15170

putative fimbrial adhesin

UTI89

putative Yqi fimbrial adhesin

95

0.84

NRG857_16975

putative fimbrial-like adhesin protein AufG

ED1a

putative fimbrial-like adhesin protein AufG

94

0.62

NRG857_17635

LpfE protein precursor

O26:H11 str. 11368

putative fimbrial adhesin protein

86

0.68

NRG857_17920

putative haemagglutinin/Invasin

CFT073

putative adhesin

87

0.98

NRG857_21795

type 1 fimbiral adhesin FimH

APEC O1

type 1 fimbrial adhesin FimH

100

0.95


Nash et al. BMC Genomics 2010 11:667   doi:10.1186/1471-2164-11-667

Open Data