Table 1

List of genes differentially transcribed (≥ 5-fold) in E. histolytica HM-1:IMSS cell lines A and B identified by microarray analyses and real-time PCR

Gene name

Accession-No. Gene

Microarry results (x-fold)

Real time-PCR results (x-fold)


Cell line A

Cell line B

Cell line A

Cell line B


EhRab7E protein

XM_646110

62.00

743.45


Hypothetical protein

XM_648456

52.11

866.52


EhRab7D protein

XM_646823

25.37

125.00


EhMP8-2 (gp63)

XM_647540

21.44

70.58


C2 domain containing protein

XM_650207

16.65

1000.00


EhRab7G protein

XM_651385

14.50

50.00


C2 domain containing protein

XM_650951

6.62

33.35


Hypothetical protein

XM_644469

3.52

5.71


Hypothetical protein

XM_643681

3.46

7.53


AIG1 family protein

XM_648725

14.29

100.00


Hypothetical protein

XM_645291

14.28

50.00


AIG1 family protein

XM_645223*

12.50

4.76


Hypothetical protein (AIG)

XM_648115*

12.50

100.00


Hypothetical protein

XM_645139

9.09

5.00


Hypothetical protein

XM_647137

8.33

7.14


Serine-threonine-isoleucine rich protein

XM_648869

6.25

3.85


Hypothetical protein

XM_649962

5.26

980.00


Hypothetical protein

XM_646695

5.3

4.5


AIG1 family protein

XM_643009*

4.34

100.00


(Fe-hydrogenase 2

XM_647747

2.44

3.22)#


* Removed from NCBI

# Identified as differential in proteomic and transcriptomic approach

Biller et al. BMC Genomics 2010 11:63   doi:10.1186/1471-2164-11-63

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