Table 2

Effect of ftrA and ftrB deletion on the transcriptome of LVS

Locusa

Gene product

Fold-change in ftrAb

Fold change in ftrBb


FTL_0045

orotidine 5'-phosphate decarboxylase

1.8

NA

FTL_0207

pyrrolidone-carboxylate peptidase

2.6

NA

FTL_0902

oxidoreductase

1.8

NA

FTL_1922

YggT family protein

10.8

NA

FTL_0324

pseudogene

NA

0.7

FTL_0421

lipoprotein

NA

0.7

FTL_0836

hypothetical protein

NA

8.2

FTL_1754

hypothetical membrane protein

NA

1.5

FTL_1966

anthranilate synthase component I

NA

0.7


a Genes included had ≥1.5 average fold-change in mRNA level (calculated for all spots) and for which each of the five spots for the gene on the microarray had fold-changes ≥1.2

b Change in mRNA level in mutant strain compared to wild-type LVS

Postic et al. BMC Genomics 2010 11:625   doi:10.1186/1471-2164-11-625

Open Data