Table 7

BLASTX hits to 3,681 tribes containing 120,926 conserved nematode proteins

CAP3

CLC

MIRA

Newbler 2.3

Newbler 2.5

SeqMan


% of unique tribes hit

91.7

92.2

91.4

87.0*

92.0

92.4

% of unique tribes hit where individual HSPs covered 80% of target protein

81.7

81.1

78.9

77.1*

82.1

81.6


Note: E-value cutoff 1e-5

* indicates a value significantly lower than the others (p < 0.01), using a Huber M-estimator.

Kumar and Blaxter BMC Genomics 2010 11:571   doi:10.1186/1471-2164-11-571

Open Data