Email updates

Keep up to date with the latest news and content from BMC Genomics and BioMed Central.

Open Access Highly Accessed Open Badges Research article

Comparing de novo assemblers for 454 transcriptome data

Sujai Kumar and Mark L Blaxter*

Author Affiliations

Institute of Evolutionary Biology, University of Edinburgh, West Mains Road, Edinburgh EH9 3JT, UK

For all author emails, please log on.

BMC Genomics 2010, 11:571  doi:10.1186/1471-2164-11-571

Published: 16 October 2010

Additional files

Additional file 1:

Supplementary Materials. Figure S1: Trimmed read length histograms. A section describing the advantages and disadvantages of each assembler.

Format: DOC Size: 218KB Download file

This file can be viewed with: Microsoft Word Viewer

Open Data

Additional file 2:

Results of merging three assemblies. Assembly metrics as a result of merging three first-order assemblies. Alignments of merged assemblies to reference sequences.

Format: XLS Size: 62KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data