Open Access Research article

Gene expression profiling in the stress control brain region hypothalamic paraventricular nucleus reveals a novel gene network including Amyloid beta Precursor Protein

Amalia Tsolakidou13, Ludwig Czibere1, Benno Pütz1, Dietrich Trümbach2, Markus Panhuysen1, Jan M Deussing1, Wolfgang Wurst12, Inge Sillaber1, Rainer Landgraf1, Florian Holsboer1 and Theo Rein1*

Author Affiliations

1 Max-Planck Institute of Psychiatry, Munich, Germany

2 Helmholtz Centre and Technical University Munich, Institute for Developmental Genetics, Neuherberg, Germany; and German Centre for Neurodegenerative Diseases, Munich, Germany

3 Department of Psychiatry and Psychotherapy, Technical University of Munich

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BMC Genomics 2010, 11:546  doi:10.1186/1471-2164-11-546

Published: 8 October 2010



The pivotal role of stress in the precipitation of psychiatric diseases such as depression is generally accepted. This study aims at the identification of genes that are directly or indirectly responding to stress. Inbred mouse strains that had been evidenced to differ in their stress response as well as in their response to antidepressant treatment were chosen for RNA profiling after stress exposure. Gene expression and regulation was determined by microarray analyses and further evaluated by bioinformatics tools including pathway and cluster analyses.


Forced swimming as acute stressor was applied to C57BL/6J and DBA/2J mice and resulted in sets of regulated genes in the paraventricular nucleus of the hypothalamus (PVN), 4 h or 8 h after stress. Although the expression changes between the mouse strains were quite different, they unfolded in phases over time in both strains. Our search for connections between the regulated genes resulted in potential novel signalling pathways in stress. In particular, Guanine nucleotide binding protein, alpha inhibiting 2 (GNAi2) and Amyloid β (A4) precursor protein (APP) were detected as stress-regulated genes, and together with other genes, seem to be integrated into stress-responsive pathways and gene networks in the PVN.


This search for stress-regulated genes in the PVN revealed its impact on interesting genes (GNAi2 and APP) and a novel gene network. In particular the expression of APP in the PVN that is governing stress hormone balance, is of great interest. The reported neuroprotective role of this molecule in the CNS supports the idea that a short acute stress can elicit positive adaptational effects in the brain.