Table 5

Prediction results of SVM-Prot by using 117 aaRSs of main dataset.

S.No.

Predicted Result of SVM-Prot

Number of aaRSs


1

Zinc-binding

55


2

EC 6.1.-.-: Ligases - Forming Carbon-Oxygen Bonds

13


3

All DNA-binding

8


4

Iron-binding

8


5

EC 2.7.-.-: Transferases - Transferring Phosphorus-Containing Groups

5


6

Magnesium-binding

4


7

EC 3.6.-.-: Hydrolases - Acting on Acid Anhydrides

3


8

All lipid-binding proteins

3


9

Manganese-binding

3


10

Metal-binding

3


11

EC 3.1.-.-: Hydrolases - Acting on Ester Bonds

2


12

Aptamer-binding protein

1


13

EC 2.4.-.-: Transferases - Glycosyltransferases

1


14

EC 5.4.-.-: Isomerases - Intramolecular Transferases

1


15

Ligases - Forming Carbon-Oxygen Bonds

1


16

Photosystem II

1


17

RNA-binding Proteins

1


18

TC 3.A.5 Type II (general) secretory pathway (IISP) family

1


19

Transmembrane

1


20

tRNA-binding Proteins

1


21

Tyrosine Kinase Receptors

1


*Broad-level correctly predicted tRNA synthetase by SVM-Prot method is highlighted by bold font.

Panwar and Raghava BMC Genomics 2010 11:507   doi:10.1186/1471-2164-11-507

Open Data