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Open Access Research article

Transcriptional profiling of root-knot nematode induced feeding sites in cowpea (Vigna unguiculata L. Walp.) using a soybean genome array

Sayan Das12, Jeffrey D Ehlers1, Timothy J Close1 and Philip A Roberts2*

Author Affiliations

1 Department of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA

2 Department of Nematology, University of California, Riverside, CA 92521, USA

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BMC Genomics 2010, 11:480  doi:10.1186/1471-2164-11-480

Published: 19 August 2010

Additional files

Additional file 1:

Principal component analysis (PCA) plot of cowpea genome response to nematode infection at 3 days post-inoculation. Each dot represents the mean of a particular condition (treatment).

Format: PPT Size: 144KB Download file

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Additional file 2:

Genes passing 1.5-fold filter in the incompatible cowpea-RKN interaction (9 days post-inoculation).

Format: XLS Size: 91KB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional file 3:

Genes passing 1.5-fold filter in the compatible cowpea-RKN interaction (9 days post-inoculation).

Format: XLS Size: 112KB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional file 4:

Genes passing 1.5-fold filter in infected Rk compared to the infected null-Rk (9 days post-inoculation).

Format: XLS Size: 66KB Download file

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Additional file 5:

Genes passing 1.5-fold filter in the incompatible cowpea-RKN interaction (3 days post-inoculation).

Format: XLS Size: 91KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 6:

Genes passing 1.5-fold filter in the compatible cowpea-RKN interaction (3 days post-inoculation).

Format: XLS Size: 93KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 7:

Genes passing 1.5-fold filter in infected Rk compared to the infected null-Rk (3 days post-inoculation).

Format: XLS Size: 30KB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional file 8:

Genes differentially expressed in both 9- and 3-dpi samples in cowpea-RKN incompatible interaction.

Format: XLS Size: 29KB Download file

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Additional file 9:

Genes differentially expressed in both 9- and 3-dpi samples in cowpea-RKN compatible interaction.

Format: XLS Size: 32KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data