Table 5 |
||||||||||
|
Validation of microarray and RNA sequencing of yeast grown in nitrogen poor (MM) and nitrogen rich (SC) conditions using Real Time RT PCR. |
||||||||||
|
Microarray |
RNA sequencing |
RT PCR |
||||||||
|
Gene ID |
MTP |
oligo(dT) |
MTP |
oligo(dT) |
MTP |
Oligo(dT) |
||||
|
Ratio MM/SC |
p value |
Ratio MM/SC |
p value |
Ratio MM/SC |
p value |
Ratio MM/SC |
p value |
Ratio MM/SC |
Ratio MM/SC |
|
|
|
||||||||||
|
YDL244W |
1.98 |
0.00 |
3.16 |
0.11 |
28.94 |
39.62 |
||||
|
YGR225W |
1.72 |
0.00 |
7.65 |
0.00 |
4.08 |
3.13 |
||||
|
YGR249W |
1.66 |
0.01 |
5.80 |
0.00 |
4.79 |
8.20 |
||||
|
YMR025W |
1.51 |
0.00 |
3.96 |
0.15 |
2.10 |
1.57 |
||||
|
YNR072W |
-1.24 |
0.05 |
-6.32 |
0.00 |
-2.34 |
-1.36 |
||||
|
YFR034C |
-1.42 |
0.02 |
-1.25 |
0.10 |
-9.08 |
0.00 |
-6.41 |
0.08 |
1.30 |
1.24 |
|
YKR053C |
-5.37 |
0.00 |
-1.88 |
0.14 |
-2.16 |
0.00 |
1.15 |
0.51 |
-2.10 |
-2.05 |
|
YLR126C |
1.54 |
0.00 |
1.36 |
0.11 |
5.54 |
0.05 |
1.40 |
0.42 |
1.58 |
1.95 |
|
YMR003W |
1.25 |
0.01 |
1.11 |
0.26 |
7.91 |
0.01 |
2.65 |
0.08 |
1.03 |
1.95 |
|
YOR252W |
1.29 |
0.01 |
1.03 |
0.46 |
6.33 |
0.00 |
1.54 |
0.10 |
1.99 |
1.54 |
|
|
||||||||||
|
Adomas et al. BMC Genomics 2010 11:477 doi:10.1186/1471-2164-11-477 |
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