Open Access Highly Accessed Methodology article

High-throughput SNP discovery and assay development in common bean

David L Hyten1*, Qijian Song12, Edward W Fickus1, Charles V Quigley1, Jong-Sung Lim3, Ik-Young Choi3, Eun-Young Hwang1, Marcial Pastor-Corrales1 and Perry B Cregan1

Author Affiliations

1 Soybean Genomics and Improvement Laboratory, U.S. Department of Agriculture, Agricultural Research Service, Beltsville, Maryland 20705, USA

2 Department Plant Science and Landscape Architecture, University of Maryland, College Park, MD 20742, USA

3 Genome Research Laboratory/National Instrumentation Center for Environmental Management, Seoul National University, Seoul 151-921, South Korea

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BMC Genomics 2010, 11:475  doi:10.1186/1471-2164-11-475

Published: 16 August 2010

Additional files

Additional file 1:

SNPs used for GoldenGate design. The 3,487 SNPs along with the flanking sequence submitted for GoldenGate assay design.

Format: XLS Size: 1.4MB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 2:

Diverse Germplasm. List of the 96 diverse common bean germplasm used to test the PvOPA-1 GoldenGate assay.

Format: XLS Size: 36KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data