Table 3

Enzymes related to toxicity in seeds

Symbol

Enzyme

Unisequences

JD

JG

p-value

NJD

NJG


SEI

Serine-type inhibitor

GJCCJC2052B11.b

1

0

6.1e-01

1.36

0

endopeptidase

CPI

Cysteine protease

Contig724

2

33

5.4e-10

2.73

55.65

inhibitor

GJCCJC2009G08.b

1

0

6.1e-01

1.36

0

GJCCJC2052B11.b

1

0

6.1e-01

1.36

0

JGCCJG2001C08.b

0

1

4.0e-01

0

1.68

JGCCJG2009F10.b

0

1

4.0e-01

0

1.68

JGCCJG2022B04.b

0

1

4.0e-01

0

1.68

JGCCJG2042G12.b1

0

1

4.0e-01

0

1.68

JGCCJG2063F11.b

0

1

4.0e-01

0

1.68

JGCCJG2067E09.b

0

1

4.0e-01

0

1.68

FPS2

Farnesyl diphosphate

GJCCJC2080E09.b

1

0

6.1e-01

1.36

0

synthase 2

GGR

Geranylgeranyl-

Contig785

1

1

8.4e-01

1.36

1.68

diphosphate synthase

GJCCJC2040E06.b

1

0

6.1e-01

1.36

0


Uniquences assigned to enzymes related to toxicity in seeds. The columns JD and JG shows the number of ESTs for each unisequence in developing and germinating endosperm, respectively. The p-value refers to the Audic-Claverie statistics for differential expression. NJD shows the number of ESTs in JD normalised to 10,000 reads. NJG shows the number of ESTs in JG normalised to 10,000 reads.

Costa et al. BMC Genomics 2010 11:462   doi:10.1186/1471-2164-11-462

Open Data