Table 2

The 20 most highly expressed transcripts in the germinating endosperm

Unisequence

Gene product

JG

JD

p-value


Contig1378

Subunit 8 of the mitochondrial F(O) ATP synthase complex.

129

0

8.0e-46

Contig826

Polyubiquitin

113

44

5.6e-12

Contig1113

NADP-dependent oxidoreductase, putative

112

0

6.9e-40

Contig1382

Tonoplast intrinsic protein (TIP) gamma

112

21

5.5e-21

Contig1362

Allene oxide synthase

74

0

1.3e-26

Contig1446

Isocitrate lyase

44

0

3.9e-16

Contig1038

Acetyl-CoA C-acyltransferase

42

5

1.9e-10

Contig1516

60 S ribosomal protein L13A

41

14

8.3e-06

Contig1092

Epoxide hydrolase

39

3

4.8e-11

Contig724

Cysteine protease inhibitor, putative

33

2

5.4e-10

Contig452

Tubulin alpha-2 chain

31

68

6.9e-03

Contig587

Ethylene-responsive transcription factor RAP2-12

29

11

4.3e-04

Contig1194

Cysteine-type peptidase

29

0

6.7e-11

Contig1392

Fructose-bisphosphate aldolase

29

0

6.7e-11

Contig40

L-asparagine amidohydrolase, putative

28

4

6.4e-07

Contig1606

Catalase

28

1

2.5e-09

Contig515

Cysteine proteinase, putative

25

1

2.6e-08

Contig1058

Cysteine-type peptidase

25

1

2.6e-08

Contig1108

26 S ribosomal RNA gene

25

2

2.0e-07

Contig1259

Cellular repressor of E1A-stimulated genes (CREG) family

25

0

1.7e-09


Annotation and expression levels of the 20 most highly expressed transcripts in the germinating endosperm (JG). The columns JG and JD shows the number of ESTs for each unisequence in germinating and developing endosperm, respectively. The p-value refers to the Audic-Claverie statistics for differential expression

Costa et al. BMC Genomics 2010 11:462   doi:10.1186/1471-2164-11-462

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