Table 1

Full-length contig analysis of BLAST hits with an E-value < 1-05.

alignment start amino acid position

number of contigs

contigs total

number of contigs full length (polyA)

Contigs full length total


1

384

384

184

184


2

32

416

20

204


3

24

440

16

220


4

28

468

16

236


5

18

486

8

244


6

10

496

7

251


7

16

512

9

260


8

9

521

5

265


9

13

534

8

273


543 contigs, which show an alignment to their putative homologues before amino acid position 10. 184 contigs were found to encode a full-length cDNA based on the presence of a putative initiation codon and a polyA tail.

Borchardt et al. BMC Genomics 2010 11:4   doi:10.1186/1471-2164-11-4

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