Table 1

Summary of analyzed tissue expression data sets.

Data set

Publication

Technology

Number of genes

Number of samples

Number of tissues


Rosetta1

Johnson et al., Science 2003

Agilent oligonucleotide exon microarrays

9,394

50

50

Rosetta2

Schadt et al., Genome Biology 2004

Agilent oligonucleotide microarrays

13,367

54

54

Stanford

Shyamsundar et al., Genome Biology 2005

Dual-channel cDNA microarrays

13,984

115

35

Geneatlas

Su et al., PNAS 2004

Affymetrix HG-U133A and GNF1H arrays

16,499

158

79


The number of genes refers to the probes on the arrays that could be mapped to corresponding Entrez Gene identifiers.

Russ and Futschik BMC Genomics 2010 11:305   doi:10.1186/1471-2164-11-305

Open Data