Table 2

Explanatory chromosomal factors for false negatives.

False

Negativesa

No BLAST

hitb

Autosomalc

Tel/hetd

Mel not

Founde

Melhit > hetf

Total

Explainedg


D. simulans

2021

228

549

57

185

471

945

D. yakuba

2243

231

82

53

168

247

508


a X chromosome features not showing female biased aCGH ratio

b no hit of feature sequence to heterologous genome (E < 10-14)

c any hit to an autosome of the heterologous species

d any hit to heterochromatin or telomere region

e not identified as being in excess in D. melanogaster

f more hits to D. melanogaster genome that to the heterologous genome

g false negatives with one or more chromosomal explanatory factors

Machado and Renn BMC Genomics 2010 11:304   doi:10.1186/1471-2164-11-304

Open Data