Table 1

Composition of the predicted organellar proteome of K. stuttgartiensis.

Protein family

Examples of the predicted organellar proteins

Locus tag

# proteins


Cytochrome C proteins

cytochrome c551 peroxidase

kuste2905

49

cytochrome c6

kustc0563

cbb3-type cytochrome c oxidase subunit 1 (CcoN)

kustc0429

hepta heme protein

kuste2855


Respiratory complex proteins

cd1 nitrite reductase (NirS)

kuste4136

50

NAD(P)H:quinone oxidoreductase chain 5

kustc0838

proton-translocating NADH dehydrogenase I chain A (NuoA)

kustc0822

NADH:ubiquinone oxidoreductase subunit M

kustc0840


Transporters

Ammonium transporter 1

kustc0381

27

Nitrite Transporter 1 (FocA)

kustd1720

Nitrite/nitrate antiporter (NarK)

kuste2335

copper-transporting ATPase

kuste2247


Protein translocation system

SecDF-YajC accessory complex (YajC)

kustd1963

5

SecYEG translocation complex (SecE)

kuste2951

Transmembrane pore (TatC)

kustc0286

Tat signal recognition (TatA/B)

kuste2348


Cytochrome C maturation system

thiol-disulfide oxidoreductase (ResA)

kustc0860

6

cytochrome c-type biogenesis protein (ResC)

kustd1760

thiol:disulfide interchange protein (DsbD)

kustc0946


TPR proteins

N-acetylglucosaminyltransferase (O-GlcNAc transferase)

kuste2787

32

kinesin light chain KLC (putative)

kuste2807


Hypothetical and other proteins

392


Total proteins

562


A summary of the predicted anammoxosomal sub-proteome of K. stuttgartiensis. In this set, 371 proteins are hypothetical proteins of unknown function. Some examples of proteins are listed, especially those with functions known to be related to anammox. Details of the predicted sub-proteome are stored in Additional file 2.

Medema et al. BMC Genomics 2010 11:299   doi:10.1186/1471-2164-11-299

Open Data