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Open Access Methodology article

Amplified fragment length homoplasy: in silico analysis for model and non-model species

Margot Paris*, Benjamin Bonnes, Gentile Francesco Ficetola, Bénédicte N Poncet and Laurence Després

Author Affiliations

Laboratoire d'Ecologie Alpine, CNRS-UMR 5553, Université Joseph Fourier, BP 53, 38041 Grenoble Cedex 09, France

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BMC Genomics 2010, 11:287  doi:10.1186/1471-2164-11-287

Published: 7 May 2010

Additional files

Additional file 1:

Table S1. Summary of the number of fragments and peaks per profile, homoplasy rate and maximum number of co-migrating fragments obtained in silico with all 284 different EcoRI/MseI primer combination pairs.

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Additional file 2:

Table S2. Primer combinations and sample sizes used for each model/non-model species comparison and number of in silico and empirical peaks obtained.

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