Table 3

Tandem repeat types of mono- to trinucleotide repeats for the genome of D. pulex and eleven other taxa.

Repeat type

D. pulex

D. melanogaster

A. mellifera

C. elegans

H. sapiens

M. musculus

G. gallus

A. thaliana

T. pseudonana

O. lucimarinus

N. crassa

S. Cerevisiae

min

max


A

1199.3

1473.4

4090.9

410.4

3877.7

1934.1

2474.2

1446.3

2.3

1.0

1632.4

1152.5

1.0

4090.9

C

547.8

165.6

75.5

243.0

11.9

173.4

143.6

22.4

10.7

4.0

338.6

5.2

4.0

547.8


AC

804.9

1008.4

359.9

208.7

1288.1

5353.6

204.4

82.7

48.6

11.8

229.7

79.0

11.8

5353.6

AG

955.1

309.1

3168.7

284.2

405.2

2662.5

105.3

426.8

181.7

7.7

217.3

23.4

7.7

3168.7

AT

119.1

644.2

4289.6

232.7

575.4

897.4

316.2

755.5

5.6

0.0

87.7

544.7

0.0

4289.6

CG

5.8

0.1

44.8

1.8

3.1

17.7

0.3

0.1

0.0

3056.1

1.2

0.0

0.0

3056.1


AAC

422.1

211.3

93.7

26.5

166.6

324.3

148.0

128.6

584.2

10.0

544.2

182.5

10.0

584.2

AAG

916.3

27.3

714.8

149.0

73.9

525.1

28.4

515.0

90.0

87.6

332.6

171.7

27.3

916.3

AAT

212.7

426.7

1214.4

90.6

229.8

241.7

169.7

81.1

1.0

0.0

178.6

251.4

0.0

1214.4

ACC

138.8

61.1

94.2

47.8

36.0

134.5

13.4

39.5

121.1

6.9

390.6

9.8

6.9

390.6

ACG

150.5

29.0

166.8

20.0

0.3

3.0

0.5

9.5

127.9

3030.8

158.7

24.2

0.3

3030.8

ACT

77.1

25.7

103.6

14.8

6.8

32.2

4.3

15.1

36.6

1.3

55.4

17.9

1.3

103.6

AGC

495.0

536.9

47.7

36.7

21.8

69.8

28.1

19.8

193.8

12.1

385.3

101.8

12.1

536.9

AGG

73.5

62.7

599.6

19.0

63.8

486.5

33.9

60.7

136.4

58.6

367.0

16.7

16.7

599.6

ATC

89.2

116.5

100.6

65.1

41.8

53.7

7.8

179.2

153.6

8.4

200.8

126.8

7.8

200.8

CCG

88.3

47.8

50.3

11.2

18.7

13.4

16.2

4.8

14.8

767.1

143.7

0.0

0.0

767.1


Mayer et al. BMC Genomics 2010 11:277   doi:10.1186/1471-2164-11-277

Open Data