Table 5

Number of C2H2 genes identified in Daphnia pulex (Dp) belonging to different families as compared to the updated list of C2H2 zinc finger gene families found in Homo sapiens (Hs), Drosophila melanogaster (Dm), and Caenorhabditis elegans (Ce).

#

Family

Fullname

Hs

Dm

Ce

Dp


1

SP

Specificity protein

8

3

3

3


2

ZIC

Zinc finger protein of the cerebellum/Sugarbabe

5

2

1

1


3

OVO

Protein ovo/Protein shaven baby

2

1

1

1


4

SNAIL

Neural crest transcription factor Slug/Snail/Escargot/Worniu/Scratch

5

7

3

4


5

GLI

Glioma-associated oncogene/cubitus interruptus

6

2

1

2


6

EGR/KROX

Early growth response 1/Transcription factor Zif268/Stripe

4

1

3

1


7

KLF

Kruppel-like zinc finger protein

18

6

3

10


8

ZFH1/2

Zn finger homeobox protein 1/Smad-interacting protein

2

1

1

1


9

ZFH3/4

Zn finger homeodomain protein 3-4

3

1

1

1


10

OSR

odd-skipped-related 2/Sob/Odd/Bowl

2

3

2

4


11

SPALT

Sal-like protein 1/Spalt-like transcription factor

4

2

1

1


12

DISCO

Zinc finger protein basonuclin

2

2

1

1


13

GFI

Growth factor independent protein

2

1

1

2


14

YY1

Yin and yang 1/Delta transcription factor/NF-E1/Pho

3

2

0

1


15

BLIMP

Beta-interferon gene positive regulatory domain I-binding factor

2

1

1

2


16

ZEP

HIV type I enhancer-binding protein 1/Schnurri

3

1

1

1


17

IA1

Insulinoma-associated protein 1/Nerfin

2

2

1

1


18

EVI1

Ecotropic virus integration site 1/Hamlet

2

2

1

1


19

SAP61

Splicing factor 3A subunit 3/Spliceosome-associated protein 61

1

1

1

1


20

SAP62

Splicing factor 3A subunit 2/Spliceosome-associated protein 62

1

1

1

1


21

KIN17

KIN antigenic determinant of recA protein

1

1

1

1


22

HNT

RAS responsive element binding protein 1

1

1

0

1


23

MTF

Metal regulatory element-binding transcription factor 1

1

1

0

1


24

TF3A

Transcription Factor III A

1

1

1

1


25

ZNF207

Zinc finger protein 207

1

1

1

1


26

ZNF277

Zinc finger protein 277

1

1

1

1


27

FEZ

Forebrain embryonic zinc finger protein

2

1

1

1


28

OAZ

Smad- and Olf-interacting zinc finger protein

2

1

0

1


29

ZFAM1

Zinc finger protein 706

1

2

2

1


30

ZFAM2

B-cell lymphoma/leukemia 11A

3

1

1

1


31

ZFAM4

Zinc finger protein 384/Nuclear matrix transcription factor 4

2

3

1

1


32

ZFAM5

Zinc finger protein 622/Zinc finger-like protein 9

1

1

1

1


33

ZFAM6

Zinc finger matrin-type protein 2

1

1

1

1


34

ZFAM7

zinc finger protein 598

1

1

1

1


35

ZFAM8

Juxtaposed with another zinc finger protein; JAZ

1

1

0

0


36

ZFAM9

Zinc finger protein family 9

1

1

0

1


37

ZFAM10

Bromodomain and PHD finger-containing protein

3

1

1

1


38

ZFAM11/12

Potassium channel modulatory factor

1

4

1

1


39

CTCF

CCCTC-binding factor

2

1

0

1


40

ZXD

Zinc finger X-linked Duplicated protein

3

0

1

1


Seetharam et al. BMC Genomics 2010 11:276   doi:10.1186/1471-2164-11-276

Open Data