Table 4

The updated list of C2H2 zinc finger families that are absent from one or more organisms along with their accession numbers.

Family

Homo sapiens

Drosophila melanogaster

Caenorhabditis elegans

Daphnia pulex

Location

(D. pulex, v1.1)


YY1

YY1

(P25490)

YY1/PHO

(NP_648317.1)

PHO

(Dappu-59123)

scaffold_78:192562-193513

YY2

(O15391)

PHOL

(NP_648317)

ZFP42

(Q96MM3)


HNT

RREB1

(Q92766)

PEB

(NP_476674)

PEB

(Dappu-98615)

scaffold_10:170443-175752


MTF

MTF

(Q14872)

MTF

(NP_729491)

MTF

(Dappu-227205)

scaffold_72:130738-133279


OAZ

EBF

(Q2M1K9)

OAZ-PB

(NP_001097315)

OAZ

(Dappu-95503)

scaffold_3:1704248-1709703

ZNF521

(NP_056276)


ZFAM8

JAZF1

(Q86VZ6)

CG12054

(NP_651853)


ZFAM9

PRDM13

(Q9H4Q3)

CG13296

(NP_648032)

PRDM13

(Dappu-111472)

scaffold_86:123582-125034


CTCF

CTCF

(P49711)

CTCF

(NP_648109)

CTCF

(Dappu-302037)

scaffold_158:218357-221909

CTCFL

(Q8NI51)


ZXD

ZXDA

(P98168)

ZXD

(Dappu-54047)

scaffold_39:175871-177445

ZXDB

(P98169)

ZXDC

(Q2QGD7)


Seetharam et al. BMC Genomics 2010 11:276   doi:10.1186/1471-2164-11-276

Open Data