Table 2

Characteristics of RPSA (pseudo)genes-general characteristics

Gene

Acc. No. GenBank

% nucleotide identity RPSA

Start codon/Stop codon

PolyA-signal

Frameshift mutation

Premature stop codon

Longest ORF = RPSA (position) identities/positives


RPSAP1

GQ202530

93%

ATG/TAA

Yes

No

Yes

83 aa (1-83)

95%/95%


RPSAP2

GQ202531

74%

ATG/TAA

Yes

Yes

Yes

70 aa (34-103)

56%/63%


RPSAP3

GQ202532

80%

ATG/TAA

No

Yes

Yes

84 aa (1-84)

82%/87%


RPSAP4

GQ202533

83%

No/No

No

Yes

N/A

90 aa (10-99)

48%/53%


RPSAP5

GQ202534

90%

ATG/TAA

Yes

Yes

Yes

129 aa (10-138)

91%/92%


RPSAP6

GQ202535

80%

No/No

No

Yes

N/A

106 aa (160-265)

65%/70%


RPSAP7

GQ202536

99%

ATG/TAA

Yes

No

No

295 aa (1-295)

99%/99%


RPSAP8

GQ202537

86%

No/TAA

Yes

Yes

N/A

82 aa (177-258)

80%/80%


RPSAP9

GQ202538

98%

ATG/No

No

No

No

171 aa (1-171)

100%/100%


RPSAP10

GQ202539

94%

No/TAA

Yes

Yes

N/A

57 aa (174-230)

95%/100%


RPSAP11

GQ202540

76%

No/No

Yes

Yes

N/A

107 aa (185-291)

46%/49%


Van den Broeke et al. BMC Genomics 2010 11:179   doi:10.1186/1471-2164-11-179

Open Data