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Promiscuity of enhancer, coding and non-coding transcription functions in ultraconserved elements

Danilo Licastro1, Vincenzo A Gennarino2, Francesca Petrera1, Remo Sanges1, Sandro Banfi2* and Elia Stupka34*

Author Affiliations

1 CBM scrl - Genomics, Area Science Park, Basovizza, Trieste, Italy

2 Telethon Institute of Genetics and Medicine (TIGEM), via Pietro Castellino 111, 80131, Napoli, Italy

3 UCL Cancer Institute, University College London, London, WC1E 6BT, UK

4 Centre for Gastroenterology, Institute of Cell and Molecular Science, Queen Mary University of London, London, E1 2AT, UK

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BMC Genomics 2010, 11:151  doi:10.1186/1471-2164-11-151

Published: 4 March 2010

Additional files

Additional file 1:

Supplementary Figure 1. The summary of results for PCR tested UCEs.

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Additional file 2:

Supplementary Tables. Table 1,2 The summary expression results for each UCE. Table 3,4 Tables summarizing the Gene Ontology Analysis.

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Additional file 3:

Supplementary Figure 2. RT-PCR analysis for five expressed UCEs on RNA extracted from either the nucleus or the cytoplasm of mouse ES cells.

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Additional file 4:

Supplementary Figure 3. The analysis of distance between UCEs

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