Additional file 6.

Table S2. Overrepresented Gene Ontology terms in Upregulated Transcripts. Full lists of GO terms from up- and downregulated contigs were compared against each other using the Fisher's exact test from the GOSSIP program [18], as implemented in BLAST2GO [16]. A two-tailed test with the false discovery rate (FDR) filter was employed. The number of GO-annotated transcripts used for comparison between up- (Test) and downregulated (Ref) groups of cDNAs is shown. All overrepresented GO terms belong to the biological process (BP) category (Word document).

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Barrantes et al. BMC Genomics 2010 11:115   doi:10.1186/1471-2164-11-115