Table 1

Differential expression of P. multocida genes involved in SOS response

GeneID

Product Name

Locus

AMX*

CTC*

ENR*


1244239

ImpA

impA

-0.52

-0.53

4.55

1244433

DNA-binding protein Fis

fis

ns

ns

1.41

1244528

LexA repressor

lexA

ns

1.60

9.87

1244611

Hypothetical protein PM1264

-

-0.78

-0.57

ns

1244637

Transcriptional repressor protein MetJ

metJ

-0.53

-0.74

-0.80

1244659

Hypothetical protein PM1312

-

-0.56

-0.68

-0.31

1244737

DNA-directed RNA polymerase subunit alpha

rpoA

ns

-0.77

1.27

1244795

Hypothetical protein PM1448

-

-0.81

-0.70

1.29

1244828

Hypothetical protein PM1481

-

-0.53

-0.51

-0.51

1244993

Hypothetical protein PM1646

-

-0.62

ns

-0.70

1245061

Hypothetical protein PM1714

-

-0.74

-0.91

ns

1245083

DNA-directed RNA polymerase subunit beta'

rpoC

ns

-0.76

-0.87

1245184

ATP-dependent helicase HepA

hepA

-0.77

-0.77

1.69

1245314

DNA-binding transcriptional activator GutM

gutM

-0.55

-0.69

-0.62

1243539

Hypothetical protein PM0192

recJ

-0.77

-0.79

1.24

1243679

Hypothetical protein PM0332

recN

ns

ns

11.54

1243758

DNA-dependent helicase II

uvrD

ns

ns

4.26

1243814

DNA polymerase IV

dinP

-0.76

-0.83

1.83

1244020

Hypothetical protein PM0673

-

-0.63

-0.81

-0.47

1244323

Holliday junction DNA helicase B

ruvB

ns

-0.78

2.37

1244324

Holliday junction DNA helicase motor protein

ruvA

ns

ns

3.39

1244459

DeaD

deaD

-0.78

-0.72

-0.67

1244499

DNA repair protein RadC

radC

-0.52

-0.60

-0.65

1244507

DNA polymerase III subunit beta

dnaN

ns

ns

1.41

1244526

Primosomal replication protein N

priB

ns

ns

1.67

1244563

DNA polymerase III subunit delta

holA

ns

-0.88

1.38

1244666

MutY

mutY

-0.68

-0.86

1.17

1244774

RecQ

recQ

-0.86

-0.84

1.11

1244823

DNA gyrase subunit B

gyrB

ns

1.36

1.45

1245063

NAD-dependent DNA ligase LigA

ligA

-0.84

1.08

1.56

1245164

Recombinase A

recA

ns

ns

9.96

1245177

DNA mismatch repair protein

mutS

-0.87

-0.78

1.50

1245268

ATP-dependent RNA helicase RhlB

rhlB

-0.73

-0.83

1.07

1245298

Excinuclease ABC subunit A

uvrA

-0.78

ns

2.57

1243785

Hypothetical protein PM0438

ftsH

-0.94

-0.80

1.13

1244083

Hypothetical protein PM0736

DnaK

ns

-0.74

1.50

1244087

Hypothetical protein PM0740

dnaJ

-0.74

-0.79

1.29

1245051

ClpB

clpB

-0.66

ns

2.14

1245095

ATP-dependent protease ATP-binding subunit

hslU

-0.70

ns

2.58

1245163

Recombination regulator RecX

recX

-0.54

-0.78

6.44


* Ratio of treatment/control normalized intensities. ns: no significant change in gene expression with sub-MIC of antibiotic.

Nanduri et al. BMC Genomics 2009 10(Suppl 2):S4   doi:10.1186/1471-2164-10-S2-S4

Open Data