Table 5 |
|||
|
Representation of avian species in the NCBI databases (as of June 8, 2009). |
|||
|
Species/Order |
Nucleotide/Protein |
Trace records |
PubMed |
|
|
|||
|
Chicken (Gallus gallus)/Galliformes |
927,747/35,072 |
18,186,087 |
90,868 |
|
Zebra finch (Taeniopygia guttata)/Passeriformes |
288,655 / 17,308 |
15,499,360 |
359 |
|
Turkey (Meleagris gallopavo)/Galliformes |
57,934 / 560 |
77,154 |
321 |
|
Duck (Anas platyrhynchos)/Anseriformes |
4,888 / 474 |
--- |
979 |
|
White-throated sparrow (Zonotrichia albicollis)/Passeriformes |
3,955 / 124 |
268,938 |
41 |
|
Domestic pigeon (Columba livia)/Columbiformes |
2,371 / 244 |
--- |
9,669 |
|
Red-backed fairy wren (Malarus melanocephalus)/Passeriformes |
2,026 / 394 |
--- |
1 |
|
Lazuli bunting (Passerina amoena)/Passeriformes |
1,791 / 590 |
--- |
6 |
|
Hwamei (Garrulax canorus)/Passeriformes |
1,572 / 1,340 |
--- |
1 |
|
Indigo bunting (Passerina cyanea)/Passeriformes |
1,572 / 568 |
--- |
16 |
|
Gadwall (Anas strepera)/Anseriformes |
1,233 / 514 |
--- |
16 |
|
California condor (Gymnogyps californianus)/Ciconiiformes* |
976/4 |
452,496** |
13 |
|
Yellow wagtail (Motacilla flava)/Passeriformes |
890/91 |
--- |
5 |
|
Collared flycatcher (Ficedula albicollis)/Passeriformes |
770/287 |
--- |
56 |
|
Adelie penguin (Pygoscelis adeliae)/Sphenisciformes |
671/17 |
--- |
69 |
|
European pied flycatcher (Ficedula hypoleuca)/Passeriformes |
667 / 295 |
--- |
86 |
|
White-winged fairy-wren (Malurus leucopterus)/Passeriformes |
639 / 190 |
--- |
1 |
|
Japanese quail (Coturnix japonica)/Galliformes |
634 / 487 |
--- |
4,435 |
|
|
|||
|
*According to [55,57,58] and contrary to NCBI Taxonomy database, the New World vultures are not related to storks (Ciconiiformes). ** Includes 419,240 sequences generated with 454 technology and 33,256 entries obtained with shotgun sequencing. |
|||
|
Romanov et al. BMC Genomics 2009 10(Suppl 2):S10 doi:10.1186/1471-2164-10-S2-S10 |
|||
