Table 1

Nucleotide (nt) composition (%) and A+T contents (%) of the 12 mitochondrial protein coding genes.

Ancylostoma caninum

Bunostomum phlebotomum


Gene or region

Length (nt)

A

C

G

T

A+T

Length (nt)

A

C

G

T

A+T


atp6

600

29.0

6.0

16.5

48.5

77.5

600

25.7

5.2

18.0

51.2

76.8

cox1

1578

25.3

9.6

19.5

45.6

70.9

1578

25.2

9.6

19.5

45.7

70.9

cox2

696

29.0

7.5

18.5

45.0

73.4

696

26.0

7.5

19.0

47.6

73.6

cox3

766

23.0

7.6

18.7

50.8

73.8

766

24.2

7.0

17.6

51.2

75.3

cytb

1113

26.3

7.6

17.6

48.4

74.8

1113

24.6

7.4

17.9

50.1

74.8

nad1

870

23.9

7.5

18.4

50.2

74.1

870

22.2

7.4

20.6

49.9

72.1

nad2

846

27.3

5.1

14.4

53.2

80.5

846

24.0

4.3

15.0

56.7

80.7

nad3

336

26.8

2.4

17.3

53.6

80.4

336

27.1

2.4

14.9

55.6

82.7

nad4

1230

27.6

7.1

13.5

51.8

79.4

1230

24.5

6.6

13.5

55.4

79.9

nad4L

234

26.9

3.0

16.2

53.9

80.8

234

24.4

3.4

17.5

54.7

79.1

nad5

1582

26.6

5.3

16.6

51.5

78.1

1582

26.2

4.9

16.7

52.2

78.4

nad6

432

25.7

3.2

15.5

55.6

81.3

432

20.6

4.4

17.8

57.2

77.8

rrnL

963

36.2

5.9

13.2

44.7

80.9

963

34.7

5.6

12.0

47.6

82.3

rrnS

694

37.0

6.8

15.1

41.1

78.1

694

34.0

7.5

17.3

41.2

75.2

AT-rich

272

44.1

6.3

2.9

46.7

90.1

234

40.6

4.7

7.3

47.4

88.0

Genome

13735

28.9

6.4

16.1

48.5

77.4

13790

26.9

6.2

16.7

50.1

77.0


Large and small ribosomal RNA subunits, AT-rich regions and complete mitochondrial genomes of Ancylostoma caninum and Bunostomum phlebotomum.

Jex et al. BMC Genomics 2009 10:79   doi:10.1186/1471-2164-10-79

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