Table 4 |
||
|
KEGG biochemical mappings for Plectus murrayi clusters. |
||
|
KEGG categories represented |
Unique sequences (Number of enzymes) |
Percentage§ |
|
|
||
|
Metabolism |
84 (52) |
11% |
|
Carbohydrate metabolism |
29(18) |
4% |
|
Amino acid metabolism |
14(9) |
2% |
|
Lipid metabolism |
13(8) |
2% |
|
Xenobiotics biodegradation and metabolism |
8(5) |
1% |
|
Biosynthesis of secondary metabolites |
6(3) |
<1% |
|
Energy metabolism |
5(2) |
<1% |
|
Nucleotide metabolism |
3(2) |
<1% |
|
Metabolism of other amino acids |
3(2) |
<1% |
|
Glyoxylate and dicarboxylate metabolism |
3(3) |
<1% |
|
Genetic information processing |
83 (48) |
11% |
|
Folding, sorting and degradation |
42(25) |
6% |
|
Transcription |
17(9) |
2% |
|
Translation |
16(8) |
2% |
|
Replication and repair |
8(6) |
1% |
|
Environmental information processing |
95 (47) |
12% |
|
Membrane transport |
30(15) |
4% |
|
Ligand-receptor interaction |
28(15) |
4% |
|
Signal transduction |
14(8) |
2% |
|
Signalling molecules and interaction |
13(9) |
2% |
|
Cellular processes |
19 (11) |
3% |
|
Cell growth and death |
8(5) |
1% |
|
Cell communication |
6(4) |
<1% |
|
Cell motility |
3(1) |
<1% |
|
Development |
2(1) |
<1% |
|
Unassigned‡ |
385 |
49% |
|
Hypothetical |
116 |
15% |
|
|
||
|
§Percentage based on total unique transcripts (782) with significant similarity to sequences in database. ‡Unassigned sequences are those that have significant similarity to known sequences whose functions are unclear. |
||
|
Adhikari et al. BMC Genomics 2009 10:69 doi:10.1186/1471-2164-10-69 |
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