Research article
A genomic glimpse of aminoacyl-tRNA synthetases in malaria parasite Plasmodium falciparum
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* Corresponding author: Amit Sharma amit.icgeb@gmail.com
1 Structural and Computational Biology Group, International Centre for Genetic Engineering and Biotechnology, New Delhi 110 067, India
2 Department of Biosciences, Jamia Millia Islamia University, Jamia Nagar, New-Delhi 110 025, India
3 Department of Bioscience and Biotechnology, Banasthali Vidyapith University, Banasthali, Rajasthan 304 022, India
4 Barcelona Institute for Research in Biomedicine, Barcelona Science Park, C/Samitier 1-5, Barcelona 08015, Catalonia, Spain
5 Dipartimento di Malattie Infettive, Parassitarie ed Immunomediate, Istituto Superiore di Sanità , Viale Regina Elena, 299, 00161 Rome, Italy
BMC Genomics 2009, 10:644 doi:10.1186/1471-2164-10-644
Published: 31 December 2009Additional files
Additional file 1:
List of Pf-aaRSs categorized into class I, class II, and related proteins. Gene ID, gene location, description of product and its length are given.
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Additional file 2:
Phylogenetic trees of aaRSs from P. falciparum. The evolutionary tree was constructed by the method PHYML using the MEGA 4.0. P. falciparum aaRSs are labeled green triangles. 102 species considered for the evolutionary analysis are taken from the three domains of life viz. P. berghei, P. chabaudi, P. falciparum, P. knowlesi, P. yoelii, P. vivax, H. sapiens, M. tuberculosis, D. discoidium, M. jannaschii, R. norvegicus, C. parvum, B. bovis, S. cerevisiae, D. melanogaster, Y. pestis, T. aquaticus, S. pneumoniae, S. entrica, E. coli, A. thaliana, A. pisum, A. salmonicida, B. cereus, B. thuringiensis, B. afzelii, B. burgdorferi, B. garinii, B. valaisiana, Bradyrhizobium, B. pennsylvanicus, C. acidaminovorans, H. defensa, C. taiwanensis, E. fergusonii, F. bacterium, F. novicida, F. tularensis, F. alni, G. tenuistipitata, H. arsenicoxydans, A. cellulolyticus, A. chlorophenolicus, A. ferrooxidans, Algoriphagus, A. muciniphila, Anaeromyxobacter, A. thermophilum, B. ambifaria, B. indica, B. mycoides, B. taurus, B. tribocorum, C. atlanticus, Caulobacter, C. aurantiacus, C. cellulolyticum, Citrobacter, C. pinensis, C. Ruthia, Cyanothece, D. desulfuricans, D. hafniense, Diaphorobacter, D. shibae, D. turgidum, E. cuniculi, E. lenta, E. ruminantium, Exiguobacterium, G. diazotrophicus, Geobacillus, M. maris, N. multipartita, Nocardioides, O. terrae, P. abelii, P. atlantica, P. denitrificans, P. ingrahamii, P. lavamentivorans, R. castenholzii, S. arenicola, S. fumaroxidans, X. autotrophicus, V. vadensis, V. paradoxus, T. whipplei, T. auensis, S. stellata, Ch. parvum, S. heliotrinireducens, Silicibacter, S. putrefaciens, S. usitatus, Thauera, X. laevis, Theileria annulata, Vibrio fischeri, W. succinogenes, X. tropicalis, Zeamays.
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