Research article
Revisiting the missing protein-coding gene catalog of the domestic dog
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* Corresponding author: Christophe Hitte hitte@univ-rennes1.fr
1 Institut de Génétique et Développement, CNRS UMR6061, Université de Rennes1, 2 Av du Pr. Léon Bernard, 35043 Rennes, France
2 Cancer Genetics Branch, National Human Genome Research Institute, National Institutes of Health, 50 South Drive, Bethesda MD 20892, USA
3 Centre for Genomic Regulation (CRG), Bioinformatics Program C/Dr. Aiguader, 88 08003 Barcelona, Spain
BMC Genomics 2009, 10:62 doi:10.1186/1471-2164-10-62
Published: 4 February 2009Additional files
Additional file 1:
Human-dog synteny map: Example of human chromosome 5. An example of the synteny map built between human chromosome 5 and the dog genome.
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Additional file 2:
Synteny maps characteristics. The data indicates the main characteristics of the synteny maps.
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Additional file 3:
Characterization of Consensus Orthologous IntervaLs (COILs) containing missing genes. These data file lists the characteristics of the Consensus Orthologous Intervals.
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Additional file 4:
List of the 232 new predicted canine genes. This table lists the 232 new gene predictions using the human gene identifiers from Ensembl.
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Additional file 5:
List of the 69 candidate gene losses. This table lists the gene losses using the human gene identifiers from Ensembl.
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Additional file 6:
Gene/species tree reconcilation. These data provide the gene/species tree reconcilation that show the possible duplication events specific of the primates and rodents lineages.
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Additional file 7:
Gene-expression profile characterization per tissue with significant over and under representation. The data provided show gene-expression profile characterization per tissue.
Format: PDF Size: 87KB Download file
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